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Code Listing by Daniel Asarnow

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A function to automate bacterial colony counting in images of plated agar in a Petri dish.
Provides colony_count.m to automate counting of bacterial colonies.

The approach is as follows:

1. Use Hough transform to locate Petri dish.
2. Threshold with Otsu's method.
3. Count colonies as regional maxima in the original image which are present in the segmentation.

David Young's circular Hough...