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Code Listing by Shailender Nagpal

Code 1-2 of 2   






NCBI has an implementation of BLAST algorithm on their website at www.ncbi.nlm.nih.gov/BLAST, which is good if you want to query short DNA or protein sequence against various sequence databases. The problem arises when large sequences need to be BLAST'ed against a sequence database or against each other. The results of such queries can take hours!

Why wait! This GUI downloads BLAST executables to your local computer and allows you...



This user interface allows a user to load some Affymetrix data in an Excel file and perform some basic operations on it - log transform, log ratio, normalization, noise reduction, filtering, PCA and clustering, in addition to some visualizations...