Search
Code Directory
 ASP
 ASP.NET
 C/C++
 CFML
 CGI/PERL
 Delphi
 Development
 Flash
 HTML
 Java
 JavaScript
 Pascal
 PHP
 Python
 SQL
 Tools
 Visual Basic & VB.NET
 XML
New Code
Uber App Clone 1.0
TeeChart NET for Xamarin.Forms 2017
JavaScript Framework Shield UI 1.7.33
SentiVeillance SDK Trial 6.0.171442
Instacart Clone 1.0
Dynamic Product Options for Magento 2 2.3.0
AnyChart JS Charts and Dashboards 8.0.0
Key Transformation 8.1131
AnyGantt JS Gantt Charts 8.0.0
Hex Comparison 5.12
SecureBridge 8.1
Hotelline PMS 1.0
TeeBI for RAD Studio Suite 2017
AnyStock Stock and Financial JS Charts 8.0.0
Entrepreneur News Portal 1.0.2
Top Code
Portfolio Optimizer Tool 1.0
Using MATLAB to Develop Portfolio Optimization Models 1.0
MLM Software ONE 1.5.46
Vincenty,Angle,Latitude,Longitude class 1.0.3
MMORPG Creator 1.0
Remez Algorithm 1.0
The BEST TIC-TAC-TOE 1.1
mouse simulation 1.0
Uber App Clone 1.0
VintaSoft Twain .NET SDK 10.2.0.1
Convert form XYZ coordinate to YBC format (LRA) 1.0
PlaySMS 0.1
Bangla Numbers in Date and Time 0.5
Trading Software 1.2.4
HTML Tidy Library for HTML Tools 1.1
Top Rated
Jango Clone Script 1.0
Get Random Record Based on Weight 1.0.0
Travel Portal Script 9.29
Magento Product Designer 1.0
OFOS - Just Eat Clone Script 1.0
PrestaShop Upload Images Module 1.2.1
Trading Software 1.2.4
ADO.NET Provider for ExactTarget 1.0
Solid File System OS edition 5.1
Classified Ad Lister 1.0
Aglowsoft SQL Query Tools 8.2
Sine Wave Using JavaFX 1.0
ICPennyBid Penny Auction Script 4.0
PHP Review Script 1.0
ATN Resume Finder 2.0
3D Finite Volume Poisson Solver For Ion Channels 1.0
File ID: 79040






3D Finite Volume Poisson Solver For Ion Channels 1.0
Download 3D Finite Volume Poisson Solver For Ion Channels 1.0http://www.mathworks.comReport Error Link
License: Freeware
File Size: 716.8 KB
Downloads: 34
Submit Rating:
3D Finite Volume Poisson Solver For Ion Channels 1.0 Description
Description: C-Library & Matlab Toolbox implement a numerical solution of Poisson equation

div(e*grad(u))=f

in Cartesizan 3D coordinates with respect to steeply varying dielectrical permittivity e. Library uses regular rectangular grid with mixed boundary conditions, FVM-based equation discretization and iterative methods for solving sparse linear system.

The solver can accommodate the severe jumps in dielectric permittivity typical of ion channels (d?TA=80 and d?TA=2 respectively for water and protein) and includes a Poisson-Boltzmann (PB) extension providing a solution of the linearized PB equation. The solver has been designed to calculate forces and potentials for single/multiple charges in model ion channel model with different parameters

MATLAB VERSION: 6.5 - 7.9

FILES:
C-LIBRARY:
COMMON.C, COMMON.H - data types, memory management
PSN_3D.C, PSN_3D.H - 3D Poisson solver

MATLAB TOOLBOX 3D:
PSN_3D_MEX.C - POISSON 3D MATLAB MEX SOURCE
PSN_3D_MAKE.M - MAKE MEX-DLL SCRIPT
PSN_3D_DEMO.M - POISSON 3D DEMO, CARTESIAN COORDINATES

FAST START:
1. Copy all files to appropriate folder
2. Make this folder to be current Matlab folder
3. Type "psn_3d_make" from Matlab command line to compile MEX for you platform
4. Type "psn_3d_demo" from Matlab command line to start demo

License: Freeware

Related: commonh, filesclibrarycommonc, Version, parametersmatlab, types, Memory, solvermatlab, psn, managementpsn, Channel, Calculate, Designed, linearized, providing, forces, potentials, Model, charges, singlemultiple

O/S:BSD, Linux, Solaris, Mac OS X

File Size: 716.8 KB

Downloads: 34



More Similar Code

C-Library & Matlab Toolbox implement a numerical solution of Poisson equation

div(e*grad(u))=f

for Cartesian 1D, Cartesian 2D and axis-symmetrical cylindrical coordinates with respect to steeply varying dielectrical permittivity e.
Library uses regular rectangular grid with mixed boundary conditions, FVM-based equation discretization and iterative methods for solving sparse linear system.

MATLAB...



These files are associated with the free undergraduate level textbook: 'Introductory Finite Volume Methods for PDEs' which may be downloaded from a link on my homepage which also contains worked solutions, case studies and audio visual material....



"Pegasos-Primal Estimated sub-Gradient SOlver for SVM"
is a primal optimization problem solver in Support Vector Machine classification algorithm.
See the paper for further reference.



dlvhex is a prototype solver for HEX-programs which integrate Answer-Set Programs with higher-order reasoning and external computation sources. It comes with a full-fledged plug-in framework for rapid extension development.



IGVF: GUI for finite volume

This interface contains routines nonoscillatory high order to solve numerically systems
hyperbolic conservation laws in one dimension.



Finite element assembly routines for linear triangles and tetrahedra. Also simple 3D visualization.
These files offer three efficient assembly techniques for the finite element method. The test cases are linear, continuous triangles and...



Easy to use Clebsch-Gordan coefficient solver for adding two angular momentums in Quantum Mechanics. This tool is created for my Quantum Mechanics II course offered by Dr. Thompson in Summer of 2007.

[Instruction]
Execute...



FAiR-CG provides a domain specific language in Ruby for specifying finite automata and tools for generating parser code from the finite automata definitions in various languages.



This submission contains an interface to a LBFGS solver for unconstrainted minimization problems of the form

min_{x} f(x) + c*|tilde{x}|,

where x are the parameters, f is a scalar valued real function, c is a positive scalar...



2D elastoplasticity solver for a time dependent two-yied model, which generalizes a classical model of linear kinematic hardening and features a hysteresis behaviour.

This is an updated version of Jan Valdman's code from his PhD thesis...

User Review for 3D Finite Volume Poisson Solver For Ion Channels
- required fields
     

Please enter text on the image